I did some testing and here is what I have found out:
The problem only happens when I am holding down a key or a combination of keys, and then introduce a new key, here is what I mean:
if I hold ctrl to crouch in bad company 2 I can crouch for as long as I want, but if I hit another key (lets say I tap a), in 6 seconds I will stand back up even though control is held down. If I am running in APB (shift + w), and then hit a key (lets say [), in 6 seconds I will stop running. So no matter what key(s) are being held down, if I introduce a new key, the fact that the other keys are still held down seems to be forgotten. I tried 2 different ps/2 keyboards with my converter and they had the same 6 second problem. I then tried my n52te which I assume works just like a usb keyboard, and the problem did not exist. So I guess the converter is the problem, unless someone has an idea of how to fix it I suppose I will be best of by purchasing a USB keyboard.