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When ready you'll need to boot the disk this time to Clean Install correctly: How to Boot A Computer from CD or DVD - YouTube
You'll need IE9 to run fully secure. The browser needs to be up to data at all times to keep out invaders.
We don't have many cases where those who follow the steps closely in Clean Reinstall - Factory OEM Windows 7 have problems to resolve after getting all of the Updates and Programs installed. When this does happen if they post back the problems we can help solve them quickly.
If you feel compelled to run Recovery then I'd Clean Up Factory Bloatware to get the best performance possible with a Factory Preinstall.