i solved the issue. went to command prompt using adminstrative privilege and disabled chkdsk. Restarted computer, and the chkdsk startup was gone. Then, went to command prompt and re-initialized chkdsk to come up on next restart. Restarted and boom, it went through an actual chkdsk, took an hour, checked out everything and cleaned the disk. Now everything is right in the world of computers.
My disk was dirty according to command prompt. thanks for the help guys.