CHKDSK discovered free space marked as allocated in the volume bitmap.

Oubadah

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chkdisk on my new Windows 7 install returned the following:

CHKDSK discovered free space marked as allocated in the
master file table (MFT) bitmap.
CHKDSK discovered free space marked as allocated in the volume bitmap.
Windows has made corrections to the file system.

This is a brand new clean install of Windows that's barely been used. What could have caused this?

I'm trying to troubleshoot problems with slow boots and general lack of responsiveness, and have reinstalled three times now trying to fix it...
 

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Windows 7 Ultimate x64Intel i7 2600K HT=Off, Turbo=OffG.Skill RipjawsX 4x4GB 1333MHz 9-9-9-24 2T 1.5vEVGA GTX 580 3GB
OS
Windows 7 Ultimate x64
CPU
Intel i7 2600K HT=Off, Turbo=Off
Motherboard
Gigabyte P67A-UD7-B3 BIOS: F7c
Memory
G.Skill RipjawsX 4x4GB 1333MHz 9-9-9-24 2T 1.5v
Graphics Card(s)
EVGA GTX 580 3GB
Sound Card
Creative X-Fi Titanium HD
Monitor(s) Displays
LG W2363D-PF
Screen Resolution
1290x1080 120Hz
Hard Drives
Hard Drives: Four Samsung F3 1TB (HD103SJ) #1: Operating System/Apps (Short Stroke 100GB) #2+3: Programs (Intel RAID0 64k Short Stroke 500GB) #4: General Storage.
PSU
Seasonic X-850 850W
Case
Silverstone FT02 Original USB2.0/Non-AP Fan version
Cooling
Cooler Master Hyper212+ NT-H1 TIM, AC F12 Pro fan on auto
Internet Speed
Piss poor

My Computer My Computer

At a glance

Windows 7 Ultimate SP1 64-BitIntel Core i7 870 @ 2.93GHz8Gb Dual-Channel DDR3 @ 664MHznVidia GeForce GTX 460 1024MB dedicated RAM
Computer Manufacturer/Model Number
HP Pavilion Elite 495UK
OS
Windows 7 Ultimate SP1 64-Bit
CPU
Intel Core i7 870 @ 2.93GHz
Motherboard
MSI 2A9C (CPU1)
Memory
8Gb Dual-Channel DDR3 @ 664MHz
Graphics Card(s)
nVidia GeForce GTX 460 1024MB dedicated RAM
Sound Card
Realtek HD Audio
Monitor(s) Displays
HP2310i
Screen Resolution
1920 x 1080
Hard Drives
1x1954GB Hitachi HDS22020ALA 330 (RAID), 1x1954GB Hitachi External for backup and storage
PSU
460W
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HP Elite
Cooling
Air cooled
Keyboard
Logitech K750 solar-powered keyboard
Mouse
Logitech Wireless M180 mouse
Internet Speed
2Mb
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Pure Avanti Flow Internet Radio with iPod Dock, 64Gb iPod, HP USB Speakers, Sony MDR-V500 Headphones, Sony Vaio F-Series Laptop
Have a look at Brink's tutorial explaining how to read the Event Viewer log relating to chkdsk, which may give you some pointers as to what's going on.

http://www.sevenforums.com/tutorials/96938-check-disk-chkdsk-read-event-viewer-log.html

How big is your hard drive? Problems will manifest themselves if the drive is getting full.

It was a 1TB drive, but only one 100GB partition (for the purpose of 'short stroking'). Windows was only just installed, so there was barely any space used.
 

My Computer My Computer

At a glance

Windows 7 Ultimate x64Intel i7 2600K HT=Off, Turbo=OffG.Skill RipjawsX 4x4GB 1333MHz 9-9-9-24 2T 1.5vEVGA GTX 580 3GB
OS
Windows 7 Ultimate x64
CPU
Intel i7 2600K HT=Off, Turbo=Off
Motherboard
Gigabyte P67A-UD7-B3 BIOS: F7c
Memory
G.Skill RipjawsX 4x4GB 1333MHz 9-9-9-24 2T 1.5v
Graphics Card(s)
EVGA GTX 580 3GB
Sound Card
Creative X-Fi Titanium HD
Monitor(s) Displays
LG W2363D-PF
Screen Resolution
1290x1080 120Hz
Hard Drives
Hard Drives: Four Samsung F3 1TB (HD103SJ) #1: Operating System/Apps (Short Stroke 100GB) #2+3: Programs (Intel RAID0 64k Short Stroke 500GB) #4: General Storage.
PSU
Seasonic X-850 850W
Case
Silverstone FT02 Original USB2.0/Non-AP Fan version
Cooling
Cooler Master Hyper212+ NT-H1 TIM, AC F12 Pro fan on auto
Internet Speed
Piss poor
This is simply telling you that the MFT on the filesystem contained references to file blocks that should have been marked free, but weren't. Assuming that's all that it found, it isn't likely to be a major cause of system performance issues, so it might be beneficial to know exactly what other issues you are seeing as well. This could simply be a symptom of other more major issues.
 

My Computer My Computer

At a glance

Windows 10 Pro x64Intel Core i7 4790K @ 4.5GHz32GB DDR3Nvidia GeForce GTX970
Computer type
PC/Desktop
Computer Manufacturer/Model Number
Custom
OS
Windows 10 Pro x64
CPU
Intel Core i7 4790K @ 4.5GHz
Motherboard
Asus Maximus Hero VII
Memory
32GB DDR3
Graphics Card(s)
Nvidia GeForce GTX970
Sound Card
Realtek HD Audio
Screen Resolution
1920x1200
Hard Drives
1x Samsung 250GB SSD
4x WD RE 2TB (RAIDZ)
PSU
Corsair AX760i
Case
Fractal Design Define R4
Cooling
Noctua NH-D15
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