It sounds like you never blanked your old drive out before doing the install. Since it was likely your old system drive, all of the security from your old system was present, and I'm also going to guess that you didn't use the same username and password on the new install, too.
If you wanted to avoid this in the future, backup your data from the second drive, and then once the OS is installed, format the drive as a data drive and then copy all of your files and such back to it. I also always use the same username and password on my home computer(s).
Also, you are missing out on one of the benefits of an SSD if you are installing your program elsewhere. Aside from large games, I would install everything to the SSD.