MSI Motherboard USB Issues

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I have a media box with the following specs as a secondary build.

MSI G41M-P26
ATI 4850
Intel Core 2 Duo 2.33 GHz
430 Corsair Builder Series Power Supply
2 Western Digital 640 GB HD (Blacks)
1 Western Digital 1TBHD (Blacks)
Linksys PCI N300 Wireless Card
PCI USB Card
Samsun Blu Ray Drive

What seems to be happening is that when I try to use a USB flash drive to write to after about 200mb it frezed and then after another min it ejects the USB flash Drive. At first I though it was the drivers however the same thing happens in Mac OS X Lion (I dual Boot). Then I put in the PCI USB Card and I could transfer files to the flash drive with no issues. Also when I try to boot from a flash drive it can take up to 10 min just to start loading the Windows Installation Files.

I think it may be a BIOS option that is set wrong but I can't figure it out. I have had this issue since I go the MB from newegg in december.

Ideas?
 

My Computer

Computer Manufacturer/Model Number
Asus
OS
Windows 7 Pro x64 SP1 and Mac OS X 10.8.3
CPU
Intel Core i7-3820 Sandy Bridge-E at 4.75 GHz
Motherboard
ASUS Rampage IV Extreme
Memory
8 x Corsair 8GB DDR3 64 GB Kit @1866 Overclocked @2000
Graphics Card(s)
GTX 580 and MSI R6870
Sound Card
HDMI on GPU and ACL898
Monitor(s) Displays
32" Sony EX-500 120Hz
Screen Resolution
1920x1080P
Hard Drives
1 x Corsair Force Series GT CSSD-F60GBGT-BK (OS)
2 x Western Digital Caviar Black Sata III 750GB (Raid 0)
1 x Western Digital Caviar Black Sata III 1TB (Media)
2 x Western Digital Caviar Black Sata II 640GB (Raid 0)
PSU
Corsair Professional Series Gold AX850
Case
Corsair 800D
Cooling
Corsair H80 High Performance Liquid CPU Cooler
Keyboard
HP Wireless Elite Keyboard
Mouse
HP Wireless Elite Mouse
Internet Speed
Cable, VisionTek Bigfoot Killer 2100 Gaming Network Card
Other Info
4 x GELID Solutions FN-TX12-15 120mm Case Fan with Superior Temperature Control
1 x Corsair 140mm Case Fan
1 x SilverStone FP55B Aluminum front panel 5.25" to a 3.5" bay converter
1 x Ultra Card Reader
1 x Sony Blu-ray Burner BD-5300S-0B

My Computer

Computer Manufacturer/Model Number
Custom built
OS
Windows 7 Ultimate 64 bit
CPU
AMD Phenom II X4 965 Black Edition
Motherboard
Gigabyte GA-MA790X-DS4
Memory
GSkill 4 X 2 GB PC 8500
Graphics Card(s)
XFX Radeon HD 6790 D
Sound Card
On board RealTek HD
Monitor(s) Displays
Dual monitors:Samsung SyncMaster S20B300
Screen Resolution
1600 X 900
Hard Drives
Seagate Barracuda 1TB (primary)
Seagate Barracuda 2 X 320 GB
PSU
Ultra X4 750 watt fully modular
Case
Thermaltake Overseer RX 1 full tower
Cooling
Core-Contact 92 mm CPU Cooler
Keyboard
Logitech G510
Mouse
Razor DeathAdder
Internet Speed
50/5 Mbps UL/DL
Other Info
Optical: Super Muliti DVD burner w/lightscribe, Hauppauge WinTV HVR-1800
Already tried that with no success. The slow transfer is happening even before I boot into any os.
 

My Computer

Computer Manufacturer/Model Number
Asus
OS
Windows 7 Pro x64 SP1 and Mac OS X 10.8.3
CPU
Intel Core i7-3820 Sandy Bridge-E at 4.75 GHz
Motherboard
ASUS Rampage IV Extreme
Memory
8 x Corsair 8GB DDR3 64 GB Kit @1866 Overclocked @2000
Graphics Card(s)
GTX 580 and MSI R6870
Sound Card
HDMI on GPU and ACL898
Monitor(s) Displays
32" Sony EX-500 120Hz
Screen Resolution
1920x1080P
Hard Drives
1 x Corsair Force Series GT CSSD-F60GBGT-BK (OS)
2 x Western Digital Caviar Black Sata III 750GB (Raid 0)
1 x Western Digital Caviar Black Sata III 1TB (Media)
2 x Western Digital Caviar Black Sata II 640GB (Raid 0)
PSU
Corsair Professional Series Gold AX850
Case
Corsair 800D
Cooling
Corsair H80 High Performance Liquid CPU Cooler
Keyboard
HP Wireless Elite Keyboard
Mouse
HP Wireless Elite Mouse
Internet Speed
Cable, VisionTek Bigfoot Killer 2100 Gaming Network Card
Other Info
4 x GELID Solutions FN-TX12-15 120mm Case Fan with Superior Temperature Control
1 x Corsair 140mm Case Fan
1 x SilverStone FP55B Aluminum front panel 5.25" to a 3.5" bay converter
1 x Ultra Card Reader
1 x Sony Blu-ray Burner BD-5300S-0B
Try resetting BIOS to default settings, save and exit, then reboot.

The only other explanation is the dual boot may have some impact on the USB ports. Try removing the MAC OS and see what happens.
 

My Computer

Computer Manufacturer/Model Number
Custom built
OS
Windows 7 Ultimate 64 bit
CPU
AMD Phenom II X4 965 Black Edition
Motherboard
Gigabyte GA-MA790X-DS4
Memory
GSkill 4 X 2 GB PC 8500
Graphics Card(s)
XFX Radeon HD 6790 D
Sound Card
On board RealTek HD
Monitor(s) Displays
Dual monitors:Samsung SyncMaster S20B300
Screen Resolution
1600 X 900
Hard Drives
Seagate Barracuda 1TB (primary)
Seagate Barracuda 2 X 320 GB
PSU
Ultra X4 750 watt fully modular
Case
Thermaltake Overseer RX 1 full tower
Cooling
Core-Contact 92 mm CPU Cooler
Keyboard
Logitech G510
Mouse
Razor DeathAdder
Internet Speed
50/5 Mbps UL/DL
Other Info
Optical: Super Muliti DVD burner w/lightscribe, Hauppauge WinTV HVR-1800
Reset the BIOS and still the problem remains.

I disconnected the the Blu ray drive, Mac OS X HDD and the Storage HDD and still the problem remains.

I also tried updating the BIOS and still no fix.

I am running out of ideas on why this is happing.
 

My Computer

Computer Manufacturer/Model Number
Asus
OS
Windows 7 Pro x64 SP1 and Mac OS X 10.8.3
CPU
Intel Core i7-3820 Sandy Bridge-E at 4.75 GHz
Motherboard
ASUS Rampage IV Extreme
Memory
8 x Corsair 8GB DDR3 64 GB Kit @1866 Overclocked @2000
Graphics Card(s)
GTX 580 and MSI R6870
Sound Card
HDMI on GPU and ACL898
Monitor(s) Displays
32" Sony EX-500 120Hz
Screen Resolution
1920x1080P
Hard Drives
1 x Corsair Force Series GT CSSD-F60GBGT-BK (OS)
2 x Western Digital Caviar Black Sata III 750GB (Raid 0)
1 x Western Digital Caviar Black Sata III 1TB (Media)
2 x Western Digital Caviar Black Sata II 640GB (Raid 0)
PSU
Corsair Professional Series Gold AX850
Case
Corsair 800D
Cooling
Corsair H80 High Performance Liquid CPU Cooler
Keyboard
HP Wireless Elite Keyboard
Mouse
HP Wireless Elite Mouse
Internet Speed
Cable, VisionTek Bigfoot Killer 2100 Gaming Network Card
Other Info
4 x GELID Solutions FN-TX12-15 120mm Case Fan with Superior Temperature Control
1 x Corsair 140mm Case Fan
1 x SilverStone FP55B Aluminum front panel 5.25" to a 3.5" bay converter
1 x Ultra Card Reader
1 x Sony Blu-ray Burner BD-5300S-0B
The only other possibilities are extreme. One is a complete re-install of OS. The next would be bad ports on the mobo....which would mean an RMA of mobo on down time and a re-install of OS when new mobo arrives. The last one would be a bad thumb drive...only problem with that theory is that it worked on PCI card. I'm leaning towards bad mobo usb ports.

Just a thought..could be a bad controller for the usb ports...either a controller driver needs to be updated or a bad controller on the mobo itself.
 

My Computer

Computer Manufacturer/Model Number
Custom built
OS
Windows 7 Ultimate 64 bit
CPU
AMD Phenom II X4 965 Black Edition
Motherboard
Gigabyte GA-MA790X-DS4
Memory
GSkill 4 X 2 GB PC 8500
Graphics Card(s)
XFX Radeon HD 6790 D
Sound Card
On board RealTek HD
Monitor(s) Displays
Dual monitors:Samsung SyncMaster S20B300
Screen Resolution
1600 X 900
Hard Drives
Seagate Barracuda 1TB (primary)
Seagate Barracuda 2 X 320 GB
PSU
Ultra X4 750 watt fully modular
Case
Thermaltake Overseer RX 1 full tower
Cooling
Core-Contact 92 mm CPU Cooler
Keyboard
Logitech G510
Mouse
Razor DeathAdder
Internet Speed
50/5 Mbps UL/DL
Other Info
Optical: Super Muliti DVD burner w/lightscribe, Hauppauge WinTV HVR-1800
Yea, I think that it is a bad USB controller. All of my flash drives and external HDD work fine on other computers just not this one. I just hate RMAing.
 

My Computer

Computer Manufacturer/Model Number
Asus
OS
Windows 7 Pro x64 SP1 and Mac OS X 10.8.3
CPU
Intel Core i7-3820 Sandy Bridge-E at 4.75 GHz
Motherboard
ASUS Rampage IV Extreme
Memory
8 x Corsair 8GB DDR3 64 GB Kit @1866 Overclocked @2000
Graphics Card(s)
GTX 580 and MSI R6870
Sound Card
HDMI on GPU and ACL898
Monitor(s) Displays
32" Sony EX-500 120Hz
Screen Resolution
1920x1080P
Hard Drives
1 x Corsair Force Series GT CSSD-F60GBGT-BK (OS)
2 x Western Digital Caviar Black Sata III 750GB (Raid 0)
1 x Western Digital Caviar Black Sata III 1TB (Media)
2 x Western Digital Caviar Black Sata II 640GB (Raid 0)
PSU
Corsair Professional Series Gold AX850
Case
Corsair 800D
Cooling
Corsair H80 High Performance Liquid CPU Cooler
Keyboard
HP Wireless Elite Keyboard
Mouse
HP Wireless Elite Mouse
Internet Speed
Cable, VisionTek Bigfoot Killer 2100 Gaming Network Card
Other Info
4 x GELID Solutions FN-TX12-15 120mm Case Fan with Superior Temperature Control
1 x Corsair 140mm Case Fan
1 x SilverStone FP55B Aluminum front panel 5.25" to a 3.5" bay converter
1 x Ultra Card Reader
1 x Sony Blu-ray Burner BD-5300S-0B
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