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If you still suspect a rootkit, then you need to look at it with GParted. This is a bootable partition manager that will allow you to see the contents of your drive, including any hidden partitions.
Rootkits generally cloak themselves from Windows disk management. This application will show the entire contents of the disk.
GParted -- A free application for graphically managing disk device partitions
D/L GParted, select the boot medium you wish to use & run it at boot time. Any rootkit will show up, usually at the end of the drive, as a hidden boot partition between 1 to 10 MB depending on the variant.
You might want to d/l & run RKill, then run your malware scanners again. After running RKill, do NOT reboot.
RKill Download
RKill is a program that was developed at BleepingComputer.com that attempts to terminate known malware processes so that your normal security software can then run and clean your computer of infections. When RKill runs it will kill malware processes and then removes incorrect executable associations and fixes policies that stop us from using certain tools. When finished it will display a log file that shows the processes that were terminated while the program was running.
As RKill only terminates a program's running process, and does not delete any files, after running it you should not reboot your computer as any malware processes that are configured to start automatically will just be started again. Instead, after running RKill you should immediately scan your computer using some sort of anti-malware or anti-virus program so that the infections can be properly removed.