CHKDSK deleted 20 GB of data

cdov

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I've had a series of problems this past week that's been driving me crazy. TLDR version: I lost about 20 GB of data after running CHKDSK on my 2x 4TB RAID 1 array, and I don't know how to get it back.

I have a desktop computer running Windows 7 x64. About a week ago, my computer got stuck in a Startup Repair loop, making me unable to use my computer at all. I tried every single restore point to no avail. There was a bunch of data on the disk that I didn't have backed up, so I decided to buy a new hard drive, install a clean copy of Windows on it, and get as much data off the old drive as I could. Which seemed to work okay, except...

I also had 2x 4 TB data drives with important data that I had set up in a RAID 1 mirrored configuration using Windows Disk Management. I know next to nothing about configuring RAID setups. I had assumed my data was safe, and that a clean installation of Windows would pick up the old RAID configuration. In Disk Management, I right-clicked to 'Import Foreign Disk.' I'm not sure if this is where it went wrong, but I restarted the computer before the re-sync completed in order to install some Windows Updates. Upon rebooting, the computer automatically started running CHKDSK, and started reporting many 'Deleting Orphan File Record Segment' messages. CHKDSK had been running for about 30 min before I returned to my computer.

I started panicking, and shut down the computer in fear that it was deleting my data. I rebooted, this time opting to skip the CHKDSK. However, when trying to access the folders on the drive, I just received 'file or directory is corrupted and unreadable' errors. Based on suggestions from Googling around, I decided to run another CHKDSK, although I did it from the Windows GUI, and checked the box 'Automatically fix file system errors.' It got stuck on one file a few hours in. I rebooted the system and let the automatic CHKDSK run, which completed without any more of the 'Deleting orphan file record segment' messages.

However, after completing the CHKDSK operation, I noticed that the drive was reporting about 20 GB less data, and a bunch of important files and folders were missing.

Afterwards, the Disk Management re-sync completed, but it's reporting a 'Failed Redundancy.' There is a little memo bubble on the second disk saying 'The disk is offline because it has a signature collision with another disk that is online.'

I've been pulling hairs and spending hours on this. What can I do to get my data back??

Thanks in advance!
 

My Computer My Computer

At a glance

Windows 7 Ultimate x64WS DUAL XEON E5420 2.50GHz, 12MB cache, 1333 ...8 GBNvidia GeForce GTX 570
Computer type
PC/Desktop
Computer Manufacturer/Model Number
BOXX
OS
Windows 7 Ultimate x64
CPU
WS DUAL XEON E5420 2.50GHz, 12MB cache, 1333 MHz FSB
Motherboard
Supero X7DWA-N
Memory
8 GB
Graphics Card(s)
Nvidia GeForce GTX 570
Hard Drives
SanDisk 960GB SSD
2x WD 4 TB Drives (Raid 1)
Browser
Chrome

My Computer My Computer

At a glance

Desk1 7 Home Prem / Desk2 10 Pro / Main lap A...Desk1 i5 3750K / Laptop i7 GTX 860M / Desk2 i...Desk1 8GB (1866) / Desk2 16GB (1333) / Laptop...Desk 1& 2NVidia GTX 650 & Laptops on board Intel
Computer type
PC/Desktop
Computer Manufacturer/Model Number
Own build (new) Desk1 / Asus ROG Win 7 / Desk2 1st build
OS
Desk1 7 Home Prem / Desk2 10 Pro / Main lap Asus ROG 10 Pro 2 laptop Toshiba 7 Pro Asus P2520 7 & 10
CPU
Desk1 i5 3750K / Laptop i7 GTX 860M / Desk2 i5 2500
Motherboard
Desk1 Asus P877-V / Desk2 Gigabyte H67 UD3H / Laptop ?
Memory
Desk1 8GB (1866) / Desk2 16GB (1333) / Laptop 8Gb DDR3
Graphics Card(s)
Desk 1& 2NVidia GTX 650 & Laptops on board Intel
Sound Card
Desk 1 & 2 -XONAR DG Realtek High Def audio Laptop
Monitor(s) Displays
Desk 1 Benq HD 2450 / Desk2 Philips 24" / Laptop 17.5"
Screen Resolution
1920x1080 D1 & D2 & Laptop 1
Hard Drives
Desk1 Samsung 120GB 830 SSD
Asus ROG 256GB 850 Pro SSD
Desk2 Samsung 840 256 SSD
Toshiba 120GB EVO
PSU
Desk 1 Corsair HX 1050/ Laptop ? / Desk 2 Corsair HX 650
Case
Desk 1 Cooler HAF XM ? Toshiba laptop / Desk2 Coolermaster
Cooling
Fans on all Desk1 -2 Desk2 - all Coolermasters 5 Laptop ?
Keyboard
Desk 1 MS Sidewinder X6 Desk 2 MS Sidewinder X 4
Mouse
Desk 1&2 - Gigabyte MS 900 gamer - laptop - Logitec wireless
Internet Speed
ADSL2+
Other Info
One other Desktop (tester) and spare Toshba laptop both with SSD's
Running Kaspersky 2016 ISS on all machines config'd identically
Logitec audio stereo systems on each machine (x3)
Canon MG5250MFC
Router/modem TP-Link running WPA2SK
Thanks for your reply.

I ran Recuva and went through the previews (without restoring the files yet), and it looks like there are still a lot of files missing. Also, the files don't seem to retain their file names or file structures, so it would take forever to organize them. Are there other means of recovering the files? (or other ways to run Recuva so that it picks up more files? - I did a Deep Scan)

Just to be clear on how I should proceed at this point, should I do something like this?
(1) Buy two large hard drives, and -->
(2) First back up current hard drive onto one of the drives
(3) Run Recuva and back up files to the other drive
(4) Reformat old Raid 1 array that failed, and maybe use a hardware raid instead of software raid?

In the future, would it be better to invest in getting a NAS device or something?

Thank you!
 

My Computer My Computer

At a glance

Windows 7 Ultimate x64WS DUAL XEON E5420 2.50GHz, 12MB cache, 1333 ...8 GBNvidia GeForce GTX 570
Computer type
PC/Desktop
Computer Manufacturer/Model Number
BOXX
OS
Windows 7 Ultimate x64
CPU
WS DUAL XEON E5420 2.50GHz, 12MB cache, 1333 MHz FSB
Motherboard
Supero X7DWA-N
Memory
8 GB
Graphics Card(s)
Nvidia GeForce GTX 570
Hard Drives
SanDisk 960GB SSD
2x WD 4 TB Drives (Raid 1)
Browser
Chrome
P.S. I did find a found.000 folder on the drive, but it's 0 bytes and doesn't contain any files
 

My Computer My Computer

At a glance

Windows 7 Ultimate x64WS DUAL XEON E5420 2.50GHz, 12MB cache, 1333 ...8 GBNvidia GeForce GTX 570
Computer type
PC/Desktop
Computer Manufacturer/Model Number
BOXX
OS
Windows 7 Ultimate x64
CPU
WS DUAL XEON E5420 2.50GHz, 12MB cache, 1333 MHz FSB
Motherboard
Supero X7DWA-N
Memory
8 GB
Graphics Card(s)
Nvidia GeForce GTX 570
Hard Drives
SanDisk 960GB SSD
2x WD 4 TB Drives (Raid 1)
Browser
Chrome
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